Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015871541.1_cds_XP_016434442.1_30501
CDS Infomation

[gene=LOC107760848] [db_xref=GeneID:107760848] [protein=2-oxoglutarate dehydrogenase, mitochondrial-like] [partial=5'] [protein_id=XP_016434442.1] [location=join(<6..46,131..463,1773..2019,2598..2726,2807..3022,3350..3473,3757..3992)] [gbkey=CDS]
Sequence

TTTAAGTCACCTGCACAGCTTTCACGTGTCAGAAACACTGGTGTCAAACCTGAGATCTTG
AAGGACGTTGGAAAAGCAATCACAACTCTTCCAGAGGACTTTAAGCCTCACAGAGCAATA
AAAAAGGTTTATGATGAGCGTAAGAAAATGATTGAGACAGGGGAGCGTGTTGACTGGGCA
TTGGGAGAAGCACTTGCTTTTGCAACATTGCTGGTGGAAGGAAATCATGTTAGGTTGAGT
GGTCAGGATGTTGAGAGAGGTACTTTCAGTCACAGACATTCTGTTCTTCATGATCAGGAG
ACCGGGGCAAAGTACTGTCCTCTTGATCATGTTATGATGAACCAAAATGAAGAGATGTTC
ACCGTGAGCAACAGCTCCCTTTCAGAGTTTGGTGTTCTGGGATTTGAACTGGGTTATTCA
ATGGAAAATCCAAACTCTTTGGTTCTCTGGGAAGCCCAATTTGGTGATTTTTCCAACGGA
GCTCAAGTAATATTTGACCAGTTTTTGAGCAGTGGAGAGGCCAAGTGGTTGCGCCAGACT
GGGTTGGTTGTGCTTCTTCCACATGGTTATGATGGCCAGGGCCCTGAGCATTCCAGTGCA
CGTTTGGAACGGTTCCTCCAGATGAGTGATGATAACCCCTTTGTCATTCCGGAGATGGAA
CCTACATTGAGGAAACAGATCCAGGAATGTAACTGGCAGGTGGTGAATGTGACAACTCCT
GCAAATTATTTCCATGTGCTCAGGCGTCAGATTCACAGAGATTTCCGTAAACCTCTTATT
GTGATGTCCCCGAAGAACTTGCTCCGTCACAAGGAGTGCAAGTCAAACCTGTCTGAGTTT
GATGATGTCCAAGGTCACCCAGGTTTTGACAAACAAGGTACCCGGTTTAAGCGTTTGATA
AAAGATCAGAACGACCACTCAGATCTTGAAGAGGGTATCAGACGCTTGGTCCTTTGCTCT
GGAAAGGTGTATTATGAGCTTGATGAGGAGAGGAAGAAAGTTAGTGGGAAAGACGTTGCA
ATCTGTCGGGTGGAACAGCTTTCTCCTTTCCCATACGACCTTGTTCAACGTGAATTGAAG
CGATATCCAAATGCGGAGATTGTTTGGTGCCAAGAGGAGCCAATGAACATGGGTGCATAC
AGTTACATTGCACCACGTCTTTGTACTGCGATGAAAGCACTGGGCAGAGGTGATATGGAT
GACATAAAATATGTTGGTCGAGCTCCTTCTGCTGCCACAGCTACTGGTTTCCAGCAGGTT
CATGTGAAAGAACAGACCGAGCTTGTCCAGAAAGCCTTGCAACAGGATCCAATTAATTCT
CCCTGA

Peptide Sequence

PEP ID

XP_016434442.1
PEP Infomation

PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like, partial [Nicotiana tabacum]
Sequence

FKSPAQLSRVRNTGVKPEILKDVGKAITTLPEDFKPHRAIKKVYDERKKMIETGERVDWA
LGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGAKYCPLDHVMMNQNEEMF
TVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFSNGAQVIFDQFLSSGEAKWLRQT
GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMEPTLRKQIQECNWQVVNVTTP
ANYFHVLRRQIHRDFRKPLIVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLI
KDQNDHSDLEEGIRRLVLCSGKVYYELDEERKKVSGKDVAICRVEQLSPFPYDLVQRELK
RYPNAEIVWCQEEPMNMGAYSYIAPRLCTAMKALGRGDMDDIKYVGRAPSAATATGFQQV
HVKEQTELVQKALQQDPINSP

Transcript Sequence

Gene sequence data has not been registered.